Papers on DNA and related problems

For related papers with random interactions, see below

30.    Jaya Maji, F. Seno, A. Trovato and S. M. Bhattacharjee       J. Stat. Mech. (2017) 073203
         Title: Bubble-bound state of triple-stranded DNA: Efimov Physics in DNA with repulsion
         arXiv:1703.09432 

29. F. Mura,     S. M. Bhattacharjee, J. Maji, M. Masetto, Flavio Seno, A. Trovato   J. Low Temp. Phys. 185, 102 (2016) (Special issue)
         Title: Efimov-like behaviour in low-dimensional polymer models
         pdf

28. Tanmoy Pal,     S. M. Bhattacharjee   Phys. Rev. E93, 052102 (2016)
         Title: Rigidity of Melting DNA
         arXiv:1508.04122  pdf

27. Tanmoy Pal, Poulomi Sadhukhan,    S. M. Bhattacharjee   Phys. Rev. E 91, 042105 (2015)
         Title: Efimov-like phase of a three-stranded DNA and the renormalization-group limit cycle
         arXiv:1409.8127  pdf

26. Poulomi Sadhukhan     S. M. Bhattacharjee   Ind. J. Physics, 88, 895 (2014) (Special Issue on the occasion of 125th Birth Anniversary of Sir C V Raman)
         Title: Thermodynamic relations for DNA phase transitions
         arXiv:1401.5451  pdf

25. Jaya Maji, S. M. Bhattacharjee, F. Seno and A. Trovato       Phys Rev E89, 012121 (2014)
         Title: Melting behavior and different bound states in three-stranded DNA models
         arXiv:1306.4206  pdf

24.    S. M. Bhattacharjee   Achille Giacometti   and Amos Maritan J. Phys.: Condens. Matter 25 (2013) 503101
         Title: Flory theory for polymers
         arXiv:1308.2414  pdf

23. Garima Mishra, Poulomi Sadhukhan, S. M. Bhattacharjee, and Sanjay Kumar     PRE 87, 022718 (2013)
         Title: Dynamical phase transition of a periodically driven DNA
         arXiv:1204.2913  pdf

22.    Tanmoy Pal, Poulomi Sadhukhan, and S. M. Bhattacharjee   Phys. Rev. Lett. 110, 028105 (2013)
         Title: Renormalization Group Limit Cycle for Three-Stranded DNA
         arXiv:1208.3359  pdf

21. Jaya Maji     S. M. Bhattacharjee   Phys. Rev. E 86, 041147 (2012)
         Title: Efimov effect of triple-stranded DNA: Real-space renormalization group and zeros of the partition function
         arXiv:1207.3670  pdf

20.    Poulomi Sadhukhan and S. M. Bhattacharjee   EPL 98 (2012) 10008
         Title: Entanglement entropy of a quantum unbinding transition and entropy of DNA
         arXiv:1110.2131  pdf

19.     Poulomi Sadhukhan, Jaya Maji and S. M. Bhattacharjee   EuroPhys. Letts. 95 (2011) 48009 (open access)
         Title: Type II DNA: When the interfacial energy becomes negative
         arXiv:1009.1021  pdf

18.    Jaya Maji and S. M. Bhattacharjee   EuroPhys. Letts. 92 (2010) 58004 (open access)
         Title: Dynamic phase transition in the conversion of B-DNA to Z-DNA
         arXiv:1010.1723  pdf

17.    Jaya Maji, S. M. Bhattacharjee, F. Seno, A. Trovato   New J. Phys. 12 (2010) 083057 (open access) (in IOPSELECT)
         Title: When a DNA triple helix melts: an analogue of the Efimov state
          arXiv:1005.3628  pdf

16.    S. M. Bhattacharjee   J. Phys.: Condens. Matter 22 155102 (2010)
         Title: Interfacial instability and DNA fork reversal by repair proteins
          arXiv:0909.0723  pdf

15. R. Kapri     S. M. Bhattacharjee   EuroPhys. Letts. 83, 68002 (2008)
         Title: Manipulating a single adsorbed DNA for a critical endpoint
          arXiv:0803.3440v3  pdf

14.    R. Kapri and S. M. Bhattacharjee   Physica A: Stat Mech and its Appl 384, 10 (2007)
         Title: Bubbles in DNA by random force
                                    pdf

13.    Rajeev Kapri, S. M. Bhattacharjee   Phys. Rev. Lett. 98, 098101 (2007)
         Title: Randomly forced DNA
          cond-mat/0607512  pdf

12.    R. Kapri and S. M. Bhattacharjee   J. Phys.: Condens. Matter 18 (2006) S215
         Title: Unzipping DNA by force: thermodynamics and finite size behaviour
          cond-mat/0511531  pdf

11.    Rajeev Kapri and S. M. Bhattacharjee   Phys. Rev. E 72, 051803 (2005)
         Title: Title: Unzipping an adsorbed polymer in a dirty or random environment
          cond-mat/0505315  pdf

10.    S. Kumar, D. Giri and S. M. Bhattacharjee   Phys. Rev. E71, 051804 (2005)
         Title: Force induced triple point for interacting polymers
          cond-mat/0407261  pdf

9.    R. Kapri, S. M. Bhattacharjee and F. Seno   Phys. Rev. Lett. 93, 248102 (2004)
         Title: Complete phase diagram of DNA unzipping: Eye, Y fork, and triple point
          cond-mat/0403752  pdf

8.    S. M. Bhattacharjee   Europhysics Letts. 65, 574 (2004)
         Title: Helicase activity on DNA as a propagating front
          cond-mat/0307380  pdf

7.    S. M. Bhattacharjee and F. Seno   J. Phys. A 36,  L181 (2003)
         Title: Helicase on DNA: a phase coexistence based mechanism
          cond-mat/0205254  pdf

6.    S. M. Bhattacharjee and D. Marenduzzo   J. Phys. A 35,  L349 (2002)
         Title: DNA sequence from the unzipping force? One mutation problem
           cond-mat/0106110  pdf

5.    S. M. Bhattacharjee                                       Europhys. Lett. 57, 772 (2002)
         Title: Comment on "A simple model for DNA denaturation"
           cond-mat/0203155    pdf

4.    D. Marenduzzo, S. M. Bhattacharjee, A. Maritan,  E. Orlandini  and F. Seno            Phys. Rev. Lett. 88, 028102 (2002)
         Title: Dynamical scaling of the DNA unzipping transition
           cond-mat/0103142  pdf

3.    E. Orlandini, S. M. Bhattacharjee, D. Marenduzzo, A. Maritan    and F. Seno  J. Phys. A 34, L751 (2001)
         Title: Mechanical denaturation of DNA: existence of a low temperature denaturation
          cond-mat/0109521  pdf

2.    S. M. Bhattacharjee,           Ind. J. of Phys. A. 76A, 69 (2002)
         Title: Unzipping of DNA: A hypothesis on correlation during replication
         cond-mat/0010132          pdf

1.    S. M. Bhattacharjee,                     J. Phys. A 33, L423 (2000).
         Title: Unzipping DNAs: towards the first step of replication
         cond-mat/9912297      pdf     E


Random interaction


6.    S. M. Bhattacharjee   in "Statistics of Linear Polymers in Disordered Media", ed. by B.K. Chakrabarti, Elsevier 2005
         Title: Directed polymers and Randomness
          cond-mat/0505283 

5.    S. Mukherji, S. M. Bhattacharjee and  A. Baumgärtner       J. Phys. A 29, L115 (1996).
        Title: Scaling of fluctuation for directed polymers with random interaction
        cond-mat/9601119  pdf

4.    S. M. Bhattacharjee and S. Mukherji,           Phys. Rev. E 52, 4860 (1995)
        Title: Finite size correction in a disordered system: a new divergence
            cond-mat/9411105     pdf

3.    S. Mukherji and S. M. Bhattacharjee,           Phys. Rev. E 52, 1930 (1995)
        Title:      Failure of the Harris criterion for directed polymers on hierarchical lattices
                                       pdf

2.    S. Mukherji and S. M. Bhattacharjee, Phys. Rev. E48, 3483 (1993)
        Title:        Directed polymers with random interaction: An exactly solvable model
            cond-mat/9311028     pdf

1.    S. M. Bhattacharjee and S. Mukherji,           Phys. Rev. Letts. 70, 49 (1993)
        Title:   Directed polymers with random interaction: marginal relevance and novel criticality
                                                       pdf